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RB3GP_HUMAN

Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters. [View more on UniProt]

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ELM instance Name Type Start End Partner
ELMI003573 TRG_ER_FFAT_1 TRG 583 591 -

Molecular function

Term Name % Distance from the top of the tree Annotated in RB3GP_HUMAN
GO:0017076 purine nucleotide binding 27.2727 4 no
GO:0032555 purine ribonucleotide binding 27.2727 4 no
GO:0035639 purine ribonucleoside triphosphate binding 27.2727 4 no
GO:0030695 GTPase regulator activity 9.0909 4 yes
GO:0031267 small GTPase binding 9.0909 5 yes
GO:0051020 GTPase binding 9.0909 4 yes
GO:0005096 GTPase activator activity 7.2727 4 yes
GO:0005085 guanyl-nucleotide exchange factor activity 3.6364 5 yes

Biological process

Term Name % Distance from top the of the tree Annotated in RB3GP_HUMAN
GO:0048522 positive regulation of cellular process 41.8182 4 yes
GO:0006996 organelle organization 40.0000 4 yes
GO:0008104 protein localization 38.1818 4 yes
GO:0051128 regulation of cellular component organization 34.5455 4 yes
GO:0071702 organic substance transport 32.7273 4 no
GO:0071705 nitrogen compound transport 32.7273 4 no
GO:0015031 protein transport 30.9091 4 no
GO:0016192 vesicle-mediated transport 30.9091 4 no
GO:0022607 cellular component assembly 25.4545 4 no
GO:0010646 regulation of cell communication 25.4545 4 yes
GO:0006886 intracellular protein transport 23.6364 4 no
GO:0048523 negative regulation of cellular process 23.6364 4 no
GO:0031323 regulation of cellular metabolic process 23.6364 4 yes
GO:0060255 regulation of macromolecule metabolic process 23.6364 4 yes
GO:0009893 positive regulation of metabolic process 21.8182 4 yes
GO:0010647 positive regulation of cell communication 21.8182 5 yes
GO:0023056 positive regulation of signaling 21.8182 4 yes
GO:0033043 regulation of organelle organization 21.8182 5 yes
GO:0051049 regulation of transport 21.8182 4 yes
GO:0051130 positive regulation of cellular component organization 21.8182 5 yes
GO:0051171 regulation of nitrogen compound metabolic process 21.8182 4 yes
GO:0080090 regulation of primary metabolic process 21.8182 4 yes
GO:0044087 regulation of cellular component biogenesis 20.0000 4 yes
GO:0010604 positive regulation of macromolecule metabolic process 18.1818 5 yes
GO:0031325 positive regulation of cellular metabolic process 16.3636 5 yes
GO:0051173 positive regulation of nitrogen compound metabolic process 16.3636 5 yes
GO:0009889 regulation of biosynthetic process 14.5455 4 yes
GO:0031326 regulation of cellular biosynthetic process 14.5455 5 yes
GO:0051050 positive regulation of transport 14.5455 4 yes
GO:0051246 regulation of protein metabolic process 14.5455 5 yes
GO:0009891 positive regulation of biosynthetic process 12.7273 5 yes
GO:0031328 positive regulation of cellular biosynthetic process 12.7273 6 yes
GO:0033365 protein localization to organelle 12.7273 5 yes
GO:0043085 positive regulation of catalytic activity 12.7273 4 yes
GO:0051247 positive regulation of protein metabolic process 12.7273 6 yes
GO:0009894 regulation of catabolic process 10.9091 4 yes
GO:0010556 regulation of macromolecule biosynthetic process 10.9091 5 yes
GO:0010638 positive regulation of organelle organization 10.9091 6 yes
GO:0031399 regulation of protein modification process 10.9091 6 yes
GO:0060627 regulation of vesicle-mediated transport 10.9091 4 yes
GO:1902115 regulation of organelle assembly 10.9091 5 yes
GO:0009896 positive regulation of catabolic process 9.0909 5 yes
GO:0031329 regulation of cellular catabolic process 9.0909 5 yes
GO:0031331 positive regulation of cellular catabolic process 9.0909 6 yes
GO:0044089 positive regulation of cellular component biogenesis 9.0909 5 yes
GO:0050804 modulation of chemical synaptic transmission 9.0909 5 yes
GO:0051336 regulation of hydrolase activity 9.0909 4 yes
GO:0099177 regulation of trans-synaptic signaling 9.0909 4 yes
GO:0017157 regulation of exocytosis 7.2727 5 yes
GO:0031401 positive regulation of protein modification process 7.2727 7 yes
GO:0043269 regulation of ion transport 7.2727 5 yes
GO:0051046 regulation of secretion 7.2727 5 yes
GO:0051047 positive regulation of secretion 7.2727 5 yes
GO:0051345 positive regulation of hydrolase activity 7.2727 5 yes
GO:0072657 protein localization to membrane 7.2727 4 yes
GO:1902117 positive regulation of organelle assembly 7.2727 6 yes
GO:1903305 regulation of regulated secretory pathway 7.2727 6 yes
GO:1903530 regulation of secretion by cell 7.2727 4 yes
GO:1903532 positive regulation of secretion by cell 7.2727 5 yes
GO:2000785 regulation of autophagosome assembly 5.4545 6 yes
GO:0001654 eye development 5.4545 5 yes
GO:0007423 sensory organ development 5.4545 4 yes
GO:0010506 regulation of autophagy 5.4545 6 yes
GO:0044088 regulation of vacuole organization 5.4545 6 yes
GO:0046928 regulation of neurotransmitter secretion 5.4545 4 yes
GO:0048168 regulation of neuronal synaptic plasticity 5.4545 4 yes
GO:0051588 regulation of neurotransmitter transport 5.4545 5 yes
GO:0070972 protein localization to endoplasmic reticulum 5.4545 6 yes
GO:0072594 establishment of protein localization to organelle 5.4545 4 yes
GO:0090150 establishment of protein localization to membrane 5.4545 4 yes
GO:2000112 regulation of cellular macromolecule biosynthetic process 5.4545 6 yes
GO:2000300 regulation of synaptic vesicle exocytosis 5.4545 5 yes
GO:2000786 positive regulation of autophagosome assembly 3.6364 7 yes
GO:0007420 brain development 3.6364 4 yes
GO:0010508 positive regulation of autophagy 3.6364 7 yes
GO:0016239 positive regulation of macroautophagy 3.6364 8 yes
GO:0016241 regulation of macroautophagy 3.6364 7 yes
GO:0032890 regulation of organic acid transport 3.6364 5 yes
GO:0034389 lipid droplet organization 3.6364 5 yes
GO:0043010 camera-type eye development 3.6364 6 yes
GO:0043087 regulation of GTPase activity 3.6364 5 yes
GO:0043270 positive regulation of ion transport 3.6364 5 yes
GO:0044090 positive regulation of vacuole organization 3.6364 7 yes
GO:0048172 regulation of short-term neuronal synaptic plasticity 3.6364 5 yes
GO:0050746 regulation of lipoprotein metabolic process 3.6364 5 yes
GO:0050747 positive regulation of lipoprotein metabolic process 3.6364 6 yes
GO:0050806 positive regulation of synaptic transmission 3.6364 5 yes
GO:0051952 regulation of amine transport 3.6364 5 yes
GO:0051966 regulation of synaptic transmission, glutamatergic 3.6364 6 yes
GO:0072599 establishment of protein localization to endoplasmic reticulum 3.6364 5 yes
GO:0097051 establishment of protein localization to endoplasmic reticulum membrane 3.6364 5 yes
GO:1903059 regulation of protein lipidation 3.6364 6 yes
GO:1903061 positive regulation of protein lipidation 3.6364 7 yes
GO:1903371 regulation of endoplasmic reticulum tubular network organization 3.6364 6 yes
GO:1903373 positive regulation of endoplasmic reticulum tubular network organization 3.6364 7 yes

Disease

Term Name % Distance from top the of the tree Annotated in RB3GP_HUMAN
DOID:331 central nervous system disease 3.6364 3 no
Uniprot ID Details Highest evidence Localizing into PSD HPA (protein expression in neurons)
WDR7_HUMAN [view entry] [view interactions] Low throughput yes no
DMXL2_HUMAN [view entry] [view interactions] Low throughput yes yes
E2F4_HUMAN [view interactions] Low throughput no no
RPH3L_HUMAN [view interactions] Low throughput no no
STIM1_HUMAN [view interactions] High throughput no yes
STX4_HUMAN [view entry] [view interactions] High throughput yes no
LAP2A_HUMAN [view interactions] High throughput no yes
TMPS2_HUMAN [view interactions] High throughput no no
TM11B_HUMAN [view interactions] High throughput no no
TMPS4_HUMAN [view interactions] High throughput no yes
CLC4E_HUMAN [view interactions] High throughput no no
SCNAA_HUMAN [view interactions] High throughput no no
MLP3A_HUMAN [view entry] [view interactions] High throughput yes yes
DEFM_HUMAN [view interactions] High throughput no yes
PAB4L_HUMAN [view interactions] High throughput no no
YJU2_HUMAN [view interactions] High throughput no yes
BT2A1_HUMAN [view interactions] High throughput no yes
CF141_HUMAN [view interactions] High throughput no no
VAPB_HUMAN [view entry] [view interactions] High throughput yes yes
BCAT1_HUMAN [view interactions] High throughput no no
RCCD1_HUMAN [view interactions] High throughput no yes
LOX5_HUMAN [view interactions] High throughput no no
BRAF_HUMAN [view interactions] High throughput no yes
MSPD2_HUMAN [view interactions] High throughput no yes
AP2B1_HUMAN [view entry] [view interactions] High throughput yes yes
ATG2A_HUMAN [view interactions] High throughput no yes
TP4A3_HUMAN [view interactions] High throughput no no
MAGA6_HUMAN [view interactions] High throughput no no
GSTK1_HUMAN [view entry] [view interactions] High throughput yes yes
DISC1_HUMAN [view entry] [view interactions] High throughput yes no
RXRB_HUMAN [view interactions] High throughput no yes
NPHP1_HUMAN [view interactions] High throughput no yes
CALX_HUMAN [view entry] [view interactions] High throughput yes yes
ALK_HUMAN [view entry] [view interactions] High throughput yes yes
FGFR1_HUMAN [view interactions] High throughput no yes
VGFR3_HUMAN [view interactions] High throughput no yes
IGF1R_HUMAN [view entry] [view interactions] High throughput yes yes
INSR_HUMAN [view interactions] High throughput no yes
RET_HUMAN [view interactions] High throughput no yes
FEZ1_HUMAN [view interactions] High throughput no no
FEZ2_HUMAN [view interactions] High throughput no yes
RB22A_HUMAN [view interactions] High throughput no yes
RB39A_HUMAN [view interactions] High throughput no no
RB39B_HUMAN [view interactions] High throughput no no
LMAN1_HUMAN [view interactions] High throughput no yes
PAXI1_HUMAN [view interactions] High throughput no no
TERA_HUMAN [view entry] [view interactions] High throughput yes yes
VAPA_HUMAN [view entry] [view interactions] High throughput yes yes
RBGPR_HUMAN [view entry] [view interactions] High throughput yes yes
EED_HUMAN [view interactions] High throughput no yes
SIR2_HUMAN [view entry] [view interactions] High throughput yes yes
DCA15_HUMAN [view interactions] High throughput no no
NTRK1_HUMAN [view interactions] High throughput no yes
RBG1L_HUMAN [view interactions] High throughput no yes
SRRT_HUMAN [view interactions] High throughput no yes
ZC3HE_HUMAN [view interactions] High throughput no yes
DOCK5_HUMAN [view entry] [view interactions] High throughput yes no
PRS6B_HUMAN [view interactions] High throughput no yes
TRI25_HUMAN [view interactions] High throughput no yes
TES_HUMAN [view interactions] High throughput no yes
EGLN3_HUMAN [view interactions] High throughput no no
MYC_HUMAN [view interactions] High throughput no yes
FLCN_HUMAN [view interactions] High throughput no yes
IF44L_HUMAN [view interactions] High throughput no yes
LMBRL_HUMAN [view interactions] High throughput no no
TIF1B_HUMAN [view interactions] High throughput no yes
MLP3B_HUMAN [view interactions] High throughput no yes
HNRH1_HUMAN [view entry] [view interactions] High throughput yes yes
BCAR1_HUMAN [view interactions] High throughput no yes
TULP3_HUMAN [view interactions] High throughput no yes
COG7_HUMAN [view interactions] High throughput no yes
SRP14_HUMAN [view interactions] High throughput no no
REEP3_HUMAN [view interactions] High throughput no no
PK1L2_HUMAN [view interactions] High throughput no no
OC90_HUMAN [view interactions] High throughput no no
PER1_HUMAN [view interactions] High throughput no no
TGM2_HUMAN [view interactions] High throughput no no
PCY1A_HUMAN [view interactions] High throughput no yes
GLT12_HUMAN [view interactions] High throughput no yes
PRTN3_HUMAN [view interactions] High throughput no no
GMFB_HUMAN [view interactions] High throughput no yes
DUS16_HUMAN [view interactions] High throughput no yes
NK3R_HUMAN [view interactions] High throughput no no
RHOA_HUMAN [view entry] [view interactions] High throughput yes yes
RHOD_HUMAN [view interactions] High throughput no no
RND2_HUMAN [view interactions] High throughput no no
COPA_HUMAN [view entry] [view interactions] High throughput yes yes
COPB2_HUMAN [view entry] [view interactions] High throughput yes yes
COPE_HUMAN [view interactions] High throughput no yes
YIPF5_HUMAN [view interactions] High throughput no yes
FAS_HUMAN [view entry] [view interactions] High throughput yes no
GABPA_HUMAN [view interactions] High throughput no no
GLCNE_HUMAN [view interactions] High throughput no yes
NCOA7_HUMAN [view interactions] High throughput no yes
SEN34_HUMAN [view interactions] High throughput no yes
OTULL_HUMAN [view interactions] High throughput no no
ST7_HUMAN [view interactions] High throughput no yes
FIS1_HUMAN [view entry] [view interactions] High throughput yes yes
FKBP8_HUMAN [view entry] [view interactions] High throughput yes yes
OCAD1_HUMAN [view interactions] High throughput no yes
PTN1_HUMAN [view interactions] High throughput no yes
S2546_HUMAN [view entry] [view interactions] High throughput yes yes
RN183_HUMAN [view interactions] High throughput no no
GCR_HUMAN [view entry] [view interactions] High throughput yes yes
DNJC1_HUMAN [view interactions] High throughput no yes
DJC25_HUMAN [view interactions] High throughput no yes
SEC63_HUMAN [view interactions] High throughput no yes
AT2A1_HUMAN [view entry] [view interactions] High throughput yes no
B3GA1_HUMAN [view interactions] High throughput no yes
BAP31_HUMAN [view interactions] High throughput no yes
CKAP4_HUMAN [view entry] [view interactions] High throughput yes yes
DERL1_HUMAN [view interactions] High throughput no yes
RCAS1_HUMAN [view interactions] High throughput no yes
ELOV5_HUMAN [view interactions] High throughput no yes
EMD_HUMAN [view interactions] High throughput no yes
ERGI2_HUMAN [view interactions] High throughput no yes
CXD3_HUMAN [view interactions] High throughput no no
GOGA1_HUMAN [view interactions] High throughput no yes
DHB11_HUMAN [view interactions] High throughput no yes
3BHS7_HUMAN [view interactions] High throughput no no
LNP_HUMAN [view interactions] High throughput no yes
LRC59_HUMAN [view entry] [view interactions] High throughput yes yes
MARCS_HUMAN [view entry] [view interactions] High throughput yes yes
MET7A_HUMAN [view interactions] High throughput no no
PXMP2_HUMAN [view interactions] High throughput no no
RAB5A_HUMAN [view entry] [view interactions] High throughput yes yes
RAB5C_HUMAN [view entry] [view interactions] High throughput yes yes
RAB9A_HUMAN [view interactions] High throughput no yes
REEP5_HUMAN [view entry] [view interactions] High throughput yes yes
RPN1_HUMAN [view entry] [view interactions] High throughput yes yes
RPN2_HUMAN [view entry] [view interactions] High throughput yes yes
SC61B_HUMAN [view interactions] High throughput no yes
SEC62_HUMAN [view interactions] High throughput no yes
SSRA_HUMAN [view entry] [view interactions] High throughput yes yes
CAZA1_HUMAN [view entry] [view interactions] Computational yes yes
DC1I1_HUMAN [view entry] [view interactions] Computational yes yes
RAB18_HUMAN [view entry] [view interactions] Computational yes yes
DC1L1_HUMAN [view entry] [view interactions] Computational yes yes
DCTN2_HUMAN [view entry] [view interactions] Computational yes yes
DC1L2_HUMAN [view entry] [view interactions] Computational yes yes
RAE1_HUMAN [view interactions] Computational no yes
RAB6B_HUMAN [view entry] [view interactions] Computational yes yes
DYL1_HUMAN [view entry] [view interactions] Computational yes no
CAZA3_HUMAN [view interactions] Computational no no
DC1I2_HUMAN [view entry] [view interactions] Computational yes yes
DCTN4_HUMAN [view entry] [view interactions] Computational yes yes
CAZA2_HUMAN [view entry] [view interactions] Computational yes yes
RAB6A_HUMAN [view entry] [view interactions] Computational yes yes
DCTN3_HUMAN [view entry] [view interactions] Computational yes yes
DCTN6_HUMAN [view interactions] Computational no no
DCTN5_HUMAN [view interactions] Computational no yes
GDIB_HUMAN [view entry] [view interactions] Computational yes yes
RAE2_HUMAN [view interactions] Computational no yes
ARP10_HUMAN [view interactions] Computational no no
DYHC1_HUMAN [view entry] [view interactions] Computational yes yes
BICD2_HUMAN [view interactions] Computational no yes
RAB3A_HUMAN [view entry] [view interactions] Computational yes yes
DYL2_HUMAN [view entry] [view interactions] Computational yes no
ACTZ_HUMAN [view entry] [view interactions] Computational yes yes
GDIA_HUMAN [view entry] [view interactions] Computational yes yes
GALT1_HUMAN [view interactions] Computational no yes
GALT2_HUMAN [view interactions] Computational no yes