VP26B_HUMAN
Acts as a component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. The recruitment of the CSC to the endosomal membrane involves RAB7A and SNX3. The SNX-BAR retromer mediates retrograde transport of cargo proteins from endosomes to the trans-Golgi network (TGN) and is involved in endosome-to-plasma membrane transport for cargo protein recycling. The SNX3-retromer mediates the retrograde transport of WLS distinct from the SNX-BAR retromer pathway. The SNX27-retromer is believed to be involved in endosome-to-plasma membrane trafficking and recycling of a broad spectrum of cargo proteins. The CSC seems to act as recruitment hub for other proteins, such as the WASH complex and TBC1D5. May be involved in retrograde transport of SORT1 but not of IGF2R. Acts redundantly with VSP26A in SNX-27 mediated endocytic recycling of SLC2A1/GLUT1 . [View more on UniProt]
Interacting region for partners were not defined.
No data found.
No annotated instance was found. To search for linear motifs, use the ELM prediction server.
Molecular function
Term | Name | % | Distance from the top of the tree | Annotated in VP26B_HUMAN |
---|---|---|---|---|
GO:0043168 | anion binding | 29.1667 | 4 | no |
GO:0043169 | cation binding | 25.0000 | 4 | no |
GO:0046872 | metal ion binding | 25.0000 | 5 | no |
GO:0000166 | nucleotide binding | 25.0000 | 4 | no |
GO:0016462 | pyrophosphatase activity | 25.0000 | 5 | no |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 25.0000 | 4 | no |
GO:0017076 | purine nucleotide binding | 25.0000 | 5 | no |
GO:0017111 | ribonucleoside triphosphate phosphatase activity | 25.0000 | 6 | no |
GO:0032555 | purine ribonucleotide binding | 25.0000 | 4 | no |
GO:0035639 | purine ribonucleoside triphosphate binding | 25.0000 | 4 | no |
GO:0045296 | cadherin binding | 20.8333 | 4 | no |
GO:0042803 | protein homodimerization activity | 20.8333 | 4 | no |
Biological process
Term | Name | % | Distance from top the of the tree | Annotated in VP26B_HUMAN |
---|---|---|---|---|
GO:0008104 | protein localization | 62.5000 | 4 | yes |
GO:0071702 | organic substance transport | 62.5000 | 4 | yes |
GO:0071705 | nitrogen compound transport | 58.3333 | 4 | yes |
GO:0015031 | protein transport | 54.1667 | 4 | yes |
GO:0006886 | intracellular protein transport | 45.8333 | 4 | yes |
GO:0016482 | cytosolic transport | 41.6667 | 4 | yes |
GO:0009894 | regulation of catabolic process | 37.5000 | 4 | yes |
GO:0031323 | regulation of cellular metabolic process | 37.5000 | 4 | yes |
GO:0042147 | retrograde transport, endosome to Golgi | 37.5000 | 4 | yes |
GO:0051128 | regulation of cellular component organization | 37.5000 | 4 | no |
GO:0048522 | positive regulation of cellular process | 33.3333 | 4 | no |
GO:0060255 | regulation of macromolecule metabolic process | 33.3333 | 4 | no |
GO:0080090 | regulation of primary metabolic process | 33.3333 | 4 | no |
GO:0030030 | cell projection organization | 29.1667 | 4 | no |
GO:0120036 | plasma membrane bounded cell projection organization | 29.1667 | 5 | no |
GO:0006996 | organelle organization | 29.1667 | 4 | no |
GO:0009893 | positive regulation of metabolic process | 29.1667 | 4 | no |
GO:0048523 | negative regulation of cellular process | 29.1667 | 4 | no |
GO:0051246 | regulation of protein metabolic process | 29.1667 | 5 | no |
GO:0031329 | regulation of cellular catabolic process | 25.0000 | 5 | yes |
GO:0032456 | endocytic recycling | 25.0000 | 4 | no |
GO:0044087 | regulation of cellular component biogenesis | 25.0000 | 4 | no |
GO:0009966 | regulation of signal transduction | 25.0000 | 4 | no |
GO:0010604 | positive regulation of macromolecule metabolic process | 25.0000 | 5 | no |
GO:0010646 | regulation of cell communication | 25.0000 | 4 | no |
GO:0051247 | positive regulation of protein metabolic process | 25.0000 | 6 | no |
GO:0009892 | negative regulation of metabolic process | 25.0000 | 4 | no |
GO:0010605 | negative regulation of macromolecule metabolic process | 25.0000 | 5 | no |
GO:0042176 | regulation of protein catabolic process | 20.8333 | 5 | no |
GO:0010506 | regulation of autophagy | 20.8333 | 6 | yes |
GO:0051049 | regulation of transport | 20.8333 | 4 | no |
GO:0007034 | vacuolar transport | 20.8333 | 4 | no |
GO:0007041 | lysosomal transport | 20.8333 | 5 | no |
GO:0022607 | cellular component assembly | 20.8333 | 4 | no |
GO:0033043 | regulation of organelle organization | 20.8333 | 5 | no |
GO:0033365 | protein localization to organelle | 20.8333 | 5 | no |
GO:0031325 | positive regulation of cellular metabolic process | 20.8333 | 5 | no |
GO:0009889 | regulation of biosynthetic process | 20.8333 | 4 | no |
GO:0010468 | regulation of gene expression | 20.8333 | 6 | no |
GO:0010556 | regulation of macromolecule biosynthetic process | 20.8333 | 5 | no |
GO:0031326 | regulation of cellular biosynthetic process | 20.8333 | 5 | no |
GO:0016241 | regulation of macroautophagy | 12.5000 | 7 | yes |
GO:0071310 | cellular response to organic substance | 8.3333 | 4 | yes |
Disease
No data found.
Uniprot ID | Details | Highest evidence | Localizing into PSD | HPA (protein expression in neurons) |
---|---|---|---|---|
VPS35_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
VPS29_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
VP26A_HUMAN | [view entry] [view interactions] | Low throughput | yes | no |
TBCD5_HUMAN | [view interactions] | High throughput | no | yes |
ABCD1_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
KIF5A_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
ANR27_HUMAN | [view interactions] | High throughput | no | yes |
PPIL2_HUMAN | [view interactions] | High throughput | no | yes |
C102B_HUMAN | [view interactions] | High throughput | no | yes |
TTF1_HUMAN | [view interactions] | High throughput | no | yes |
CO4A5_HUMAN | [view interactions] | High throughput | no | no |
MYH1_HUMAN | [view interactions] | High throughput | no | no |
MYCB2_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
FKB15_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
RT30_HUMAN | [view interactions] | High throughput | no | yes |
KIF1B_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
C102A_HUMAN | [view interactions] | High throughput | no | yes |
WAC2A_HUMAN | [view interactions] | High throughput | no | yes |
WASC4_HUMAN | [view interactions] | High throughput | no | yes |
WASC5_HUMAN | [view interactions] | High throughput | no | yes |
ACTL8_HUMAN | [view interactions] | High throughput | no | no |
TRIM7_HUMAN | [view interactions] | High throughput | no | yes |
ETV6_HUMAN | [view interactions] | High throughput | no | no |
ATE1_HUMAN | [view interactions] | High throughput | no | yes |
ZC3H1_HUMAN | [view interactions] | High throughput | no | yes |
MRM1_HUMAN | [view interactions] | High throughput | no | no |
TRMO_HUMAN | [view interactions] | High throughput | no | no |
XPO7_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
IMP2L_HUMAN | [view interactions] | High throughput | no | yes |
EFHD2_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
PTHD1_HUMAN | [view interactions] | High throughput | no | no |
SORT_HUMAN | [view interactions] | High throughput | no | yes |
INSR_HUMAN | [view interactions] | High throughput | no | yes |
EGLN_HUMAN | [view interactions] | High throughput | no | no |
NPL4_HUMAN | [view interactions] | High throughput | no | yes |
RAB4A_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
ENOA_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
MOV10_HUMAN | [view interactions] | High throughput | no | no |
NXF1_HUMAN | [view interactions] | High throughput | no | yes |
NEK1_HUMAN | [view interactions] | High throughput | no | yes |
SPT5H_HUMAN | [view interactions] | High throughput | no | yes |
CF410_HUMAN | [view interactions] | High throughput | no | yes |
BTBD9_HUMAN | [view interactions] | High throughput | no | yes |
SNX27_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
NTRK1_HUMAN | [view interactions] | High throughput | no | yes |
ENTR1_HUMAN | [view interactions] | High throughput | no | no |
MTO1_HUMAN | [view interactions] | High throughput | no | yes |
TXD11_HUMAN | [view interactions] | High throughput | no | yes |
SNX16_HUMAN | [view interactions] | High throughput | no | yes |
CHD9_HUMAN | [view interactions] | High throughput | no | yes |
LOXL3_HUMAN | [view interactions] | High throughput | no | no |
EYA4_HUMAN | [view interactions] | High throughput | no | yes |
TIF1B_HUMAN | [view interactions] | High throughput | no | yes |
RIN3_HUMAN | [view interactions] | High throughput | no | yes |
GTSFL_HUMAN | [view interactions] | High throughput | no | no |
FEM1A_HUMAN | [view interactions] | High throughput | no | no |
KXDL1_HUMAN | [view interactions] | High throughput | no | yes |
FAXC_HUMAN | [view interactions] | High throughput | no | no |
SNX3_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
PNMA2_HUMAN | [view interactions] | High throughput | no | yes |
S10A6_HUMAN | [view interactions] | High throughput | no | yes |
GPM6A_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
LRC73_HUMAN | [view interactions] | High throughput | no | yes |
DNJB3_HUMAN | [view interactions] | High throughput | no | no |
R51A1_HUMAN | [view interactions] | High throughput | no | no |
FBX32_HUMAN | [view interactions] | High throughput | no | no |
PRKN_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
TRI67_HUMAN | [view interactions] | High throughput | no | no |
CL16A_HUMAN | [view interactions] | High throughput | no | yes |
CSK_HUMAN | [view interactions] | High throughput | no | yes |
ITA5_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
UBA6_HUMAN | [view interactions] | High throughput | no | no |
CAB39_HUMAN | [view interactions] | High throughput | no | yes |
SNX1_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
SNX2_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
FAF2_HUMAN | [view interactions] | High throughput | no | yes |
RAB6A_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
ZC21A_HUMAN | [view interactions] | High throughput | no | yes |
KLC1_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
PDXD1_HUMAN | [view interactions] | High throughput | no | no |
THNS1_HUMAN | [view interactions] | High throughput | no | no |
PGTA_HUMAN | [view interactions] | High throughput | no | yes |
ERP44_HUMAN | [view interactions] | High throughput | no | yes |
CHM4B_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
OSGEP_HUMAN | [view interactions] | High throughput | no | yes |
S23IP_HUMAN | [view interactions] | High throughput | no | yes |
RAB7A_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |