Features Interactions Isoform Disease Linear motifs Fingerprint Network All partners

VP26B_HUMAN

Acts as a component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. The recruitment of the CSC to the endosomal membrane involves RAB7A and SNX3. The SNX-BAR retromer mediates retrograde transport of cargo proteins from endosomes to the trans-Golgi network (TGN) and is involved in endosome-to-plasma membrane transport for cargo protein recycling. The SNX3-retromer mediates the retrograde transport of WLS distinct from the SNX-BAR retromer pathway. The SNX27-retromer is believed to be involved in endosome-to-plasma membrane trafficking and recycling of a broad spectrum of cargo proteins. The CSC seems to act as recruitment hub for other proteins, such as the WASH complex and TBC1D5. May be involved in retrograde transport of SORT1 but not of IGF2R. Acts redundantly with VSP26A in SNX-27 mediated endocytic recycling of SLC2A1/GLUT1 . [View more on UniProt]

Interacting region for partners were not defined.

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No data found.

No annotated instance was found. To search for linear motifs, use the ELM prediction server.

Molecular function

Term Name % Distance from the top of the tree Annotated in VP26B_HUMAN
GO:0043168 anion binding 29.1667 4 no
GO:0043169 cation binding 25.0000 4 no
GO:0046872 metal ion binding 25.0000 5 no
GO:0000166 nucleotide binding 25.0000 4 no
GO:0016462 pyrophosphatase activity 25.0000 5 no
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 25.0000 4 no
GO:0017076 purine nucleotide binding 25.0000 5 no
GO:0017111 ribonucleoside triphosphate phosphatase activity 25.0000 6 no
GO:0032555 purine ribonucleotide binding 25.0000 4 no
GO:0035639 purine ribonucleoside triphosphate binding 25.0000 4 no
GO:0045296 cadherin binding 20.8333 4 no
GO:0042803 protein homodimerization activity 20.8333 4 no

Biological process

Term Name % Distance from top the of the tree Annotated in VP26B_HUMAN
GO:0008104 protein localization 62.5000 4 yes
GO:0071702 organic substance transport 62.5000 4 yes
GO:0071705 nitrogen compound transport 58.3333 4 yes
GO:0015031 protein transport 54.1667 4 yes
GO:0006886 intracellular protein transport 45.8333 4 yes
GO:0016482 cytosolic transport 41.6667 4 yes
GO:0009894 regulation of catabolic process 37.5000 4 yes
GO:0031323 regulation of cellular metabolic process 37.5000 4 yes
GO:0042147 retrograde transport, endosome to Golgi 37.5000 4 yes
GO:0051128 regulation of cellular component organization 37.5000 4 no
GO:0048522 positive regulation of cellular process 33.3333 4 no
GO:0060255 regulation of macromolecule metabolic process 33.3333 4 no
GO:0080090 regulation of primary metabolic process 33.3333 4 no
GO:0030030 cell projection organization 29.1667 4 no
GO:0120036 plasma membrane bounded cell projection organization 29.1667 5 no
GO:0006996 organelle organization 29.1667 4 no
GO:0009893 positive regulation of metabolic process 29.1667 4 no
GO:0048523 negative regulation of cellular process 29.1667 4 no
GO:0051246 regulation of protein metabolic process 29.1667 5 no
GO:0031329 regulation of cellular catabolic process 25.0000 5 yes
GO:0032456 endocytic recycling 25.0000 4 no
GO:0044087 regulation of cellular component biogenesis 25.0000 4 no
GO:0009966 regulation of signal transduction 25.0000 4 no
GO:0010604 positive regulation of macromolecule metabolic process 25.0000 5 no
GO:0010646 regulation of cell communication 25.0000 4 no
GO:0051247 positive regulation of protein metabolic process 25.0000 6 no
GO:0009892 negative regulation of metabolic process 25.0000 4 no
GO:0010605 negative regulation of macromolecule metabolic process 25.0000 5 no
GO:0042176 regulation of protein catabolic process 20.8333 5 no
GO:0010506 regulation of autophagy 20.8333 6 yes
GO:0051049 regulation of transport 20.8333 4 no
GO:0007034 vacuolar transport 20.8333 4 no
GO:0007041 lysosomal transport 20.8333 5 no
GO:0022607 cellular component assembly 20.8333 4 no
GO:0033043 regulation of organelle organization 20.8333 5 no
GO:0033365 protein localization to organelle 20.8333 5 no
GO:0031325 positive regulation of cellular metabolic process 20.8333 5 no
GO:0009889 regulation of biosynthetic process 20.8333 4 no
GO:0010468 regulation of gene expression 20.8333 6 no
GO:0010556 regulation of macromolecule biosynthetic process 20.8333 5 no
GO:0031326 regulation of cellular biosynthetic process 20.8333 5 no
GO:0016241 regulation of macroautophagy 12.5000 7 yes
GO:0071310 cellular response to organic substance 8.3333 4 yes

Disease

No data found.

Uniprot ID Details Highest evidence Localizing into PSD HPA (protein expression in neurons)
VPS35_HUMAN [view entry] [view interactions] Low throughput yes yes
VPS29_HUMAN [view entry] [view interactions] Low throughput yes yes
VP26A_HUMAN [view entry] [view interactions] Low throughput yes no
TBCD5_HUMAN [view interactions] High throughput no yes
ABCD1_HUMAN [view entry] [view interactions] High throughput yes no
KIF5A_HUMAN [view entry] [view interactions] High throughput yes yes
ANR27_HUMAN [view interactions] High throughput no yes
PPIL2_HUMAN [view interactions] High throughput no yes
C102B_HUMAN [view interactions] High throughput no yes
TTF1_HUMAN [view interactions] High throughput no yes
CO4A5_HUMAN [view interactions] High throughput no no
MYH1_HUMAN [view interactions] High throughput no no
MYCB2_HUMAN [view entry] [view interactions] High throughput yes no
FKB15_HUMAN [view entry] [view interactions] High throughput yes yes
RT30_HUMAN [view interactions] High throughput no yes
KIF1B_HUMAN [view entry] [view interactions] High throughput yes yes
C102A_HUMAN [view interactions] High throughput no yes
WAC2A_HUMAN [view interactions] High throughput no yes
WASC4_HUMAN [view interactions] High throughput no yes
WASC5_HUMAN [view interactions] High throughput no yes
ACTL8_HUMAN [view interactions] High throughput no no
TRIM7_HUMAN [view interactions] High throughput no yes
ETV6_HUMAN [view interactions] High throughput no no
ATE1_HUMAN [view interactions] High throughput no yes
ZC3H1_HUMAN [view interactions] High throughput no yes
MRM1_HUMAN [view interactions] High throughput no no
TRMO_HUMAN [view interactions] High throughput no no
XPO7_HUMAN [view entry] [view interactions] High throughput yes yes
IMP2L_HUMAN [view interactions] High throughput no yes
EFHD2_HUMAN [view entry] [view interactions] High throughput yes no
PTHD1_HUMAN [view interactions] High throughput no no
SORT_HUMAN [view interactions] High throughput no yes
INSR_HUMAN [view interactions] High throughput no yes
EGLN_HUMAN [view interactions] High throughput no no
NPL4_HUMAN [view interactions] High throughput no yes
RAB4A_HUMAN [view entry] [view interactions] High throughput yes no
ENOA_HUMAN [view entry] [view interactions] High throughput yes yes
MOV10_HUMAN [view interactions] High throughput no no
NXF1_HUMAN [view interactions] High throughput no yes
NEK1_HUMAN [view interactions] High throughput no yes
SPT5H_HUMAN [view interactions] High throughput no yes
CF410_HUMAN [view interactions] High throughput no yes
BTBD9_HUMAN [view interactions] High throughput no yes
SNX27_HUMAN [view entry] [view interactions] High throughput yes no
NTRK1_HUMAN [view interactions] High throughput no yes
ENTR1_HUMAN [view interactions] High throughput no no
MTO1_HUMAN [view interactions] High throughput no yes
TXD11_HUMAN [view interactions] High throughput no yes
SNX16_HUMAN [view interactions] High throughput no yes
CHD9_HUMAN [view interactions] High throughput no yes
LOXL3_HUMAN [view interactions] High throughput no no
EYA4_HUMAN [view interactions] High throughput no yes
TIF1B_HUMAN [view interactions] High throughput no yes
RIN3_HUMAN [view interactions] High throughput no yes
GTSFL_HUMAN [view interactions] High throughput no no
FEM1A_HUMAN [view interactions] High throughput no no
KXDL1_HUMAN [view interactions] High throughput no yes
FAXC_HUMAN [view interactions] High throughput no no
SNX3_HUMAN [view entry] [view interactions] High throughput yes no
PNMA2_HUMAN [view interactions] High throughput no yes
S10A6_HUMAN [view interactions] High throughput no yes
GPM6A_HUMAN [view entry] [view interactions] High throughput yes no
LRC73_HUMAN [view interactions] High throughput no yes
DNJB3_HUMAN [view interactions] High throughput no no
R51A1_HUMAN [view interactions] High throughput no no
FBX32_HUMAN [view interactions] High throughput no no
PRKN_HUMAN [view entry] [view interactions] High throughput yes yes
TRI67_HUMAN [view interactions] High throughput no no
CL16A_HUMAN [view interactions] High throughput no yes
CSK_HUMAN [view interactions] High throughput no yes
ITA5_HUMAN [view entry] [view interactions] High throughput yes no
UBA6_HUMAN [view interactions] High throughput no no
CAB39_HUMAN [view interactions] High throughput no yes
SNX1_HUMAN [view entry] [view interactions] High throughput yes yes
SNX2_HUMAN [view entry] [view interactions] High throughput yes no
FAF2_HUMAN [view interactions] High throughput no yes
RAB6A_HUMAN [view entry] [view interactions] High throughput yes yes
ZC21A_HUMAN [view interactions] High throughput no yes
KLC1_HUMAN [view entry] [view interactions] High throughput yes no
PDXD1_HUMAN [view interactions] High throughput no no
THNS1_HUMAN [view interactions] High throughput no no
PGTA_HUMAN [view interactions] High throughput no yes
ERP44_HUMAN [view interactions] High throughput no yes
CHM4B_HUMAN [view entry] [view interactions] High throughput yes yes
OSGEP_HUMAN [view interactions] High throughput no yes
S23IP_HUMAN [view interactions] High throughput no yes
RAB7A_HUMAN [view entry] [view interactions] High throughput yes yes