Features Interactions Isoform Disease Linear motifs Fingerprint Network All partners

SNX3_HUMAN

GO
G2C
SynGO

Phosphoinositide-binding protein required for multivesicular body formation. Specifically binds phosphatidylinositol 3-phosphate (PtdIns(P3)). Also can bind phosphatidylinositol 4-phosphate (PtdIns(P4)), phosphatidylinositol 5-phosphate (PtdIns(P5)) and phosphatidylinositol 3,5-biphosphate (PtdIns(3,5)P2) . Plays a role in protein transport between cellular compartments. Together with RAB7A facilitates endosome membrane association of the retromer cargo-selective subcomplex (CSC/VPS). May in part act as component of the SNX3-retromer complex which mediates the retrograde endosome-to-TGN transport of WLS distinct from the SNX-BAR retromer pathway (PubMed, PubMed, PubMed). Promotes stability and cell surface expression of epithelial sodium channel (ENAC) subunits SCNN1A and SCNN1G . Not involved in EGFR degradation. Involved in the regulation of phagocytosis in dendritic cells possibly by regulating EEA1 recruitment to the nascent phagosomes (PubMed). Involved in iron homeostasis through regulation of endocytic recycling of the transferrin receptor TFRC presumably by delivering the transferrin:transferrin receptor complex to recycling endosomes; the function may involve the CSC retromer subcomplex . In the case of Salmonella enterica infection plays arole in maturation of the Salmonella-containing vacuole (SCV) and promotes recruitment of LAMP1 to SCVs (PubMed). [View more on UniProt]

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No data found.

No annotated instance was found. To search for linear motifs, use the ELM prediction server.

Molecular function

Term Name % Distance from the top of the tree Annotated in SNX3_HUMAN
GO:0017076 purine nucleotide binding 27.1186 4 no
GO:0032555 purine ribonucleotide binding 27.1186 4 no
GO:0035639 purine ribonucleoside triphosphate binding 27.1186 4 no
GO:0035091 phosphatidylinositol binding 16.9492 4 yes
GO:1901981 phosphatidylinositol phosphate binding 11.8644 5 yes
GO:0019902 phosphatase binding 6.7797 4 yes
GO:0019903 protein phosphatase binding 6.7797 5 yes
GO:0032266 phosphatidylinositol-3-phosphate binding 6.7797 6 yes
GO:1902936 phosphatidylinositol bisphosphate binding 6.7797 6 yes
GO:0010314 phosphatidylinositol-5-phosphate binding 5.0847 6 yes
GO:0070273 phosphatidylinositol-4-phosphate binding 5.0847 6 yes
GO:0080025 phosphatidylinositol-3,5-bisphosphate binding 5.0847 4 yes

Biological process

Term Name % Distance from top the of the tree Annotated in SNX3_HUMAN
GO:0048522 positive regulation of cellular process 57.6271 4 yes
GO:0048523 negative regulation of cellular process 47.4576 4 yes
GO:0008104 protein localization 45.7627 4 yes
GO:0010646 regulation of cell communication 45.7627 4 yes
GO:0060255 regulation of macromolecule metabolic process 45.7627 4 yes
GO:0080090 regulation of primary metabolic process 44.0678 4 yes
GO:0009966 regulation of signal transduction 42.3729 4 yes
GO:0051049 regulation of transport 42.3729 4 yes
GO:0051171 regulation of nitrogen compound metabolic process 42.3729 4 yes
GO:0071702 organic substance transport 42.3729 4 yes
GO:0071705 nitrogen compound transport 42.3729 4 yes
GO:0031323 regulation of cellular metabolic process 42.3729 4 no
GO:0015031 protein transport 40.6780 4 yes
GO:0016192 vesicle-mediated transport 40.6780 4 yes
GO:0051128 regulation of cellular component organization 37.2881 4 yes
GO:0006996 organelle organization 33.8983 4 yes
GO:0009893 positive regulation of metabolic process 33.8983 4 no
GO:0010604 positive regulation of macromolecule metabolic process 32.2034 5 no
GO:0010468 regulation of gene expression 32.2034 5 no
GO:0006886 intracellular protein transport 30.5085 4 no
GO:0032880 regulation of protein localization 30.5085 5 yes
GO:0051246 regulation of protein metabolic process 30.5085 5 yes
GO:0060341 regulation of cellular localization 30.5085 4 yes
GO:0031325 positive regulation of cellular metabolic process 28.8136 5 no
GO:0051173 positive regulation of nitrogen compound metabolic process 28.8136 5 no
GO:0051050 positive regulation of transport 27.1186 4 no
GO:0009892 negative regulation of metabolic process 27.1186 4 yes
GO:0016197 endosomal transport 27.1186 4 yes
GO:0022607 cellular component assembly 27.1186 4 no
GO:0009889 regulation of biosynthetic process 27.1186 4 no
GO:0019219 regulation of nucleobase-containing compound metabolic process 27.1186 5 no
GO:0031326 regulation of cellular biosynthetic process 27.1186 5 no
GO:0048585 negative regulation of response to stimulus 27.1186 4 no
GO:0048584 positive regulation of response to stimulus 25.4237 4 no
GO:0009894 regulation of catabolic process 25.4237 4 yes
GO:0010605 negative regulation of macromolecule metabolic process 25.4237 5 yes
GO:0010647 positive regulation of cell communication 25.4237 5 no
GO:0023056 positive regulation of signaling 25.4237 4 no
GO:0051252 regulation of RNA metabolic process 23.7288 5 no
GO:0009967 positive regulation of signal transduction 23.7288 5 no
GO:1902531 regulation of intracellular signal transduction 23.7288 5 no
GO:0051172 negative regulation of nitrogen compound metabolic process 23.7288 5 yes
GO:0033043 regulation of organelle organization 22.0339 5 no
GO:0051223 regulation of protein transport 22.0339 5 yes
GO:0060627 regulation of vesicle-mediated transport 22.0339 4 yes
GO:0070201 regulation of establishment of protein localization 22.0339 6 yes
GO:0010941 regulation of cell death 22.0339 4 no
GO:0051247 positive regulation of protein metabolic process 22.0339 6 no
GO:0009968 negative regulation of signal transduction 22.0339 5 no
GO:0010556 regulation of macromolecule biosynthetic process 22.0339 5 no
GO:0010648 negative regulation of cell communication 22.0339 5 no
GO:0023057 negative regulation of signaling 22.0339 4 no
GO:0051130 positive regulation of cellular component organization 20.3390 5 yes
GO:0019220 regulation of phosphate metabolic process 20.3390 6 no
GO:0051174 regulation of phosphorus metabolic process 20.3390 5 no
GO:0060548 negative regulation of cell death 20.3390 5 no
GO:0071310 cellular response to organic substance 20.3390 4 no
GO:0016482 cytosolic transport 18.6441 4 yes
GO:0051248 negative regulation of protein metabolic process 18.6441 6 yes
GO:0031344 regulation of cell projection organization 16.9492 5 yes
GO:0042147 retrograde transport, endosome to Golgi 16.9492 5 yes
GO:0098876 vesicle-mediated transport to the plasma membrane 16.9492 4 yes
GO:0120035 regulation of plasma membrane bounded cell projection organization 16.9492 6 yes
GO:0030111 regulation of Wnt signaling pathway 15.2542 5 yes
GO:0032456 endocytic recycling 15.2542 5 yes
GO:0042176 regulation of protein catabolic process 15.2542 5 yes
GO:0032386 regulation of intracellular transport 13.5593 5 yes
GO:0009895 negative regulation of catabolic process 11.8644 5 yes
GO:0016050 vesicle organization 11.8644 5 yes
GO:0010975 regulation of neuron projection development 10.1695 7 yes
GO:0031346 positive regulation of cell projection organization 10.1695 6 yes
GO:0042177 negative regulation of protein catabolic process 10.1695 6 yes
GO:0048193 Golgi vesicle transport 10.1695 5 yes
GO:0051051 negative regulation of transport 10.1695 4 yes
GO:0061024 membrane organization 10.1695 4 yes
GO:1903828 negative regulation of protein localization 8.4746 5 yes
GO:0007032 endosome organization 6.7797 6 yes
GO:0010976 positive regulation of neuron projection development 6.7797 7 yes
GO:0032387 negative regulation of intracellular transport 6.7797 5 yes
GO:1903649 regulation of cytoplasmic transport 6.7797 6 yes
GO:1903900 regulation of viral life cycle 6.7797 4 yes
GO:2000641 regulation of early endosome to late endosome transport 6.7797 5 yes
GO:0010324 membrane invagination 5.0847 5 yes
GO:0034499 late endosome to Golgi transport 5.0847 6 yes
GO:0046596 regulation of viral entry into host cell 5.0847 5 yes
GO:0048525 negative regulation of viral process 5.0847 4 yes
GO:0051224 negative regulation of protein transport 5.0847 5 yes
GO:0052372 modulation by symbiont of entry into host 5.0847 4 yes
GO:1903650 negative regulation of cytoplasmic transport 5.0847 6 yes
GO:1903901 negative regulation of viral life cycle 5.0847 5 yes
GO:1904950 negative regulation of establishment of protein localization 5.0847 6 yes
GO:2000642 negative regulation of early endosome to late endosome transport 5.0847 6 yes
GO:0006900 vesicle budding from membrane 3.3898 5 yes
GO:0046597 negative regulation of viral entry into host cell 3.3898 6 yes
GO:0050764 regulation of phagocytosis 3.3898 5 yes
GO:0050765 negative regulation of phagocytosis 3.3898 5 yes
GO:0070676 intralumenal vesicle formation 3.3898 6 yes

Disease

Term Name % Distance from top the of the tree Annotated in SNX3_HUMAN
DOID:331 central nervous system disease 3.3898 3 no
Uniprot ID Details Highest evidence Localizing into PSD HPA (protein expression in neurons)
VP26A_HUMAN [view entry] [view interactions] Low throughput yes no
RAB7A_HUMAN [view entry] [view interactions] Low throughput yes yes
UBP10_HUMAN [view interactions] Low throughput no yes
NRAM2_HUMAN [view interactions] Low throughput no yes
SNX3_HUMAN [view entry] [view interactions] Low throughput yes no
VPS35_HUMAN [view entry] [view interactions] Low throughput yes yes
SCNNA_HUMAN [view interactions] Low throughput no yes
KCNE3_HUMAN [view interactions] High throughput no yes
VP26B_HUMAN [view interactions] High throughput no yes
SNX12_HUMAN [view entry] [view interactions] High throughput yes yes
RN149_HUMAN [view interactions] High throughput no no
STX17_HUMAN [view interactions] High throughput no yes
PPIL3_HUMAN [view interactions] High throughput no yes
CENPM_HUMAN [view interactions] High throughput no yes
UROL1_HUMAN [view interactions] High throughput no no
MARH1_HUMAN [view interactions] High throughput no yes
DDX55_HUMAN [view interactions] High throughput no yes
STA5B_HUMAN [view interactions] High throughput no yes
UBXN6_HUMAN [view entry] [view interactions] High throughput yes yes
ARL4D_HUMAN [view interactions] High throughput no no
UBP32_HUMAN [view interactions] High throughput no yes
DERL2_HUMAN [view interactions] High throughput no yes
CLASR_HUMAN [view interactions] High throughput no yes
FACC1_HUMAN [view interactions] High throughput no no
SIAH1_HUMAN [view interactions] High throughput no yes
RFXK_HUMAN [view interactions] High throughput no yes
CIA2A_HUMAN [view interactions] High throughput no yes
T183A_HUMAN [view interactions] High throughput no no
DHH_HUMAN [view interactions] High throughput no no
XPA_HUMAN [view interactions] High throughput no yes
RN166_HUMAN [view interactions] High throughput no no
IF4A3_HUMAN [view entry] [view interactions] High throughput yes yes
GO45_HUMAN [view interactions] High throughput no yes
KLK15_HUMAN [view interactions] High throughput no no
WIF1_HUMAN [view entry] [view interactions] High throughput yes no
NPAS1_HUMAN [view interactions] High throughput no no
EFMT3_HUMAN [view interactions] High throughput no no
SIR3_HUMAN [view interactions] High throughput no yes
NTNG1_HUMAN [view interactions] High throughput no no
RHOJ_HUMAN [view interactions] High throughput no yes
RHOQ_HUMAN [view interactions] High throughput no no
RHOU_HUMAN [view interactions] High throughput no no
RHOC_HUMAN [view interactions] High throughput no no
RPAC1_HUMAN [view interactions] High throughput no no
VPS29_HUMAN [view entry] [view interactions] High throughput yes yes
NDUA7_HUMAN [view entry] [view interactions] High throughput yes yes
SBDS_HUMAN [view interactions] High throughput no yes
PPM1G_HUMAN [view interactions] High throughput no no
NDUA2_HUMAN [view entry] [view interactions] High throughput yes yes
RM53_HUMAN [view interactions] High throughput no yes
SRPRB_HUMAN [view entry] [view interactions] High throughput yes no
SUGP1_HUMAN [view interactions] High throughput no yes
SSBP_HUMAN [view entry] [view interactions] High throughput yes yes
RBMS1_HUMAN [view interactions] High throughput no no
SC23A_HUMAN [view entry] [view interactions] High throughput yes yes
PPIA_HUMAN [view entry] [view interactions] High throughput yes yes
IGBP1_HUMAN [view interactions] High throughput no yes
PSB1_HUMAN [view interactions] High throughput no yes
SAHH2_HUMAN [view entry] [view interactions] High throughput yes yes
STX7_HUMAN [view entry] [view interactions] High throughput yes yes
ZC11A_HUMAN [view interactions] High throughput no yes
PLST_HUMAN [view interactions] High throughput no yes
AK1A1_HUMAN [view entry] [view interactions] High throughput yes no
AK1C2_HUMAN [view entry] [view interactions] High throughput yes no
NDKB_HUMAN [view entry] [view interactions] High throughput yes yes
PIN1_HUMAN [view entry] [view interactions] High throughput yes yes
RBM12_HUMAN [view interactions] High throughput no yes
CAPG_HUMAN [view entry] [view interactions] High throughput yes no
CRIP1_HUMAN [view interactions] High throughput no yes
DAZP1_HUMAN [view interactions] High throughput no yes
DYL1_HUMAN [view entry] [view interactions] High throughput yes no
GLOD4_HUMAN [view entry] [view interactions] High throughput yes yes
AATC_HUMAN [view entry] [view interactions] High throughput yes yes
HEBP1_HUMAN [view interactions] High throughput no yes
HGS_HUMAN [view entry] [view interactions] High throughput yes yes
MTAP_HUMAN [view interactions] High throughput no no
PIR_HUMAN [view interactions] High throughput no no
P4R3A_HUMAN [view interactions] High throughput no yes
TRIP6_HUMAN [view interactions] High throughput no yes
UB2L3_HUMAN [view interactions] High throughput no yes
TAGL_HUMAN [view interactions] High throughput no no
TAGL2_HUMAN [view entry] [view interactions] High throughput yes no
TAGL3_HUMAN [view entry] [view interactions] High throughput yes yes
OPTN_HUMAN [view interactions] High throughput no yes
ANFY1_HUMAN [view entry] [view interactions] High throughput yes yes
ARF6_HUMAN [view entry] [view interactions] High throughput yes yes
B3GA1_HUMAN [view interactions] High throughput no yes
CAV1_HUMAN [view interactions] High throughput no no
LAMP2_HUMAN [view interactions] High throughput no yes
LAMP3_HUMAN [view interactions] High throughput no no
LTOR1_HUMAN [view entry] [view interactions] High throughput yes yes
MARCS_HUMAN [view entry] [view interactions] High throughput yes yes
RAB2A_HUMAN [view entry] [view interactions] High throughput yes yes
RAB4A_HUMAN [view entry] [view interactions] High throughput yes no
RAB5A_HUMAN [view entry] [view interactions] High throughput yes yes
RAB5C_HUMAN [view entry] [view interactions] High throughput yes yes
TFR1_HUMAN [view interactions] High throughput no yes
IFM1_HUMAN [view interactions] High throughput no no
DPP4_HUMAN [view interactions] High throughput no no
BASI_HUMAN [view entry] [view interactions] High throughput yes no
IFM3_HUMAN [view interactions] High throughput no yes
TM11B_HUMAN [view interactions] High throughput no no
ACE2_HUMAN [view interactions] High throughput no no
ABL1_HUMAN [view entry] [view interactions] High throughput yes yes
CRK_HUMAN [view entry] [view interactions] High throughput yes no
SRC_HUMAN [view entry] [view interactions] High throughput yes no
FYN_HUMAN [view entry] [view interactions] High throughput yes no
GRB2_HUMAN [view entry] [view interactions] High throughput yes yes
NCK1_HUMAN [view interactions] High throughput no yes
CXB2_HUMAN [view interactions] High throughput no yes
TFG_HUMAN [view interactions] High throughput no yes
SMC1A_HUMAN [view interactions] High throughput no yes
PYRG1_HUMAN [view interactions] High throughput no no
MPDZ_HUMAN [view entry] [view interactions] High throughput yes yes
RT05_HUMAN [view interactions] High throughput no yes
ANO3_HUMAN [view interactions] High throughput no yes
PYRG2_HUMAN [view interactions] High throughput no yes
SNR27_HUMAN [view interactions] High throughput no yes
CAV3_HUMAN [view interactions] High throughput no no
MANS1_HUMAN [view interactions] High throughput no yes
SPB5_HUMAN [view interactions] High throughput no no
EAA3_HUMAN [view entry] [view interactions] High throughput yes yes
MRAP2_HUMAN [view interactions] High throughput no no
FIBB_HUMAN [view entry] [view interactions] High throughput yes no
FCGRN_HUMAN [view interactions] High throughput no yes
T2R41_HUMAN [view interactions] High throughput no no
AR6P6_HUMAN [view interactions] High throughput no yes
UBP47_HUMAN [view interactions] High throughput no yes
H17B6_HUMAN [view interactions] High throughput no yes
CP1A1_HUMAN [view interactions] High throughput no yes
SPY2_HUMAN [view interactions] High throughput no yes
SETD3_HUMAN [view interactions] High throughput no yes
SCNM1_HUMAN [view interactions] High throughput no no
SIR4_HUMAN [view interactions] High throughput no yes
LRRK2_HUMAN [view interactions] High throughput no yes
VCAM1_HUMAN [view interactions] High throughput no no
HMGA2_HUMAN [view interactions] High throughput no yes
ATG5_HUMAN [view interactions] High throughput no no
VHL_HUMAN [view entry] [view interactions] High throughput yes yes
CRCM_HUMAN [view interactions] High throughput no no
IKKE_HUMAN [view interactions] High throughput no yes
HLAB_HUMAN [view interactions] High throughput no yes
EPB41_HUMAN [view entry] [view interactions] High throughput yes no
PTBP3_HUMAN [view interactions] High throughput no no
BMI1_HUMAN [view interactions] High throughput no yes
AR6P1_HUMAN [view interactions] High throughput no yes
RPRM_HUMAN [view interactions] High throughput no no
STX11_HUMAN [view interactions] High throughput no yes
TMM17_HUMAN [view interactions] High throughput no yes
BET1_HUMAN [view interactions] High throughput no no
LAMP1_HUMAN [view interactions] High throughput no yes
RAB9A_HUMAN [view interactions] High throughput no yes
TGON2_HUMAN [view interactions] High throughput no yes
RASK_HUMAN [view entry] [view interactions] High throughput yes no
RASN_HUMAN [view entry] [view interactions] High throughput yes no
RASH_HUMAN [view entry] [view interactions] High throughput yes no
EGFR_HUMAN [view interactions] High throughput no no
FHI1B_HUMAN [view interactions] High throughput no yes
BARD1_HUMAN [view interactions] High throughput no yes
BRCA1_HUMAN [view interactions] High throughput no yes
DNLI4_HUMAN [view interactions] High throughput no yes
PAXI1_HUMAN [view interactions] High throughput no no
T22D2_HUMAN [view interactions] High throughput no yes
ELAV1_HUMAN [view entry] [view interactions] High throughput yes yes
TERA_HUMAN [view entry] [view interactions] High throughput yes yes
ITA4_HUMAN [view interactions] High throughput no no
UBC_HUMAN [view entry] [view interactions] High throughput yes yes
MBD5_HUMAN [view interactions] High throughput no no
ITPI2_HUMAN [view interactions] High throughput no yes
KCAB2_HUMAN [view entry] [view interactions] High throughput yes yes
NR2C2_HUMAN [view interactions] High throughput no yes
UBQL2_HUMAN [view interactions] High throughput no yes
PTER_HUMAN [view interactions] High throughput no yes
SNX5_HUMAN [view entry] [view interactions] Computational yes yes
SNX6_HUMAN [view entry] [view interactions] Computational yes no
WLS_HUMAN [view entry] [view interactions] Computational yes no
SNX27_HUMAN [view entry] [view interactions] Computational yes no
SNX8_HUMAN [view interactions] Computational no yes
CFTR_HUMAN [view interactions] Computational no no