RAB13_HUMAN
The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. That Rab is involved in endocytic recycling and regulates the transport to the plasma membrane of transmembrane proteins like the tight junction protein OCLN/occludin. Thereby, it regulates the assembly and the activity of tight junctions. Moreover, it may also regulate tight junction assembly by activating the PKA signaling pathway and by reorganizing the actin cytoskeleton through the activation of the downstream effectors PRKACA and MICALL2 respectively. Through its role in tight junction assembly, may play a role in the establishment of Sertoli cell barrier. Plays also a role in angiogenesis through regulation of endothelial cells chemotaxis. Also involved in neurite outgrowth. Has also been proposed to play a role in post-Golgi membrane trafficking from the TGN to the recycling endosome. Finally, it has been involved in insulin-induced transport to the plasma membrane of the glucose transporter GLUT4 and therefore may play a role in glucose homeostasis. [View more on UniProt]
Interacting region for partners were not defined.
No data found.
No annotated instance was found. To search for linear motifs, use the ELM prediction server.
Molecular function
Term | Name | % | Distance from the top of the tree | Annotated in RAB13_HUMAN |
---|---|---|---|---|
GO:0000166 | nucleotide binding | 47.8261 | 4 | yes |
GO:0017076 | purine nucleotide binding | 47.8261 | 5 | yes |
GO:0032555 | purine ribonucleotide binding | 47.8261 | 4 | yes |
GO:0035639 | purine ribonucleoside triphosphate binding | 47.8261 | 4 | yes |
GO:0043168 | anion binding | 47.8261 | 4 | yes |
GO:0005525 | GTP binding | 39.1304 | 5 | yes |
GO:0016462 | pyrophosphatase activity | 39.1304 | 5 | yes |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 39.1304 | 4 | yes |
GO:0017111 | ribonucleoside triphosphate phosphatase activity | 39.1304 | 6 | yes |
GO:0019001 | guanyl nucleotide binding | 39.1304 | 6 | yes |
GO:0032561 | guanyl ribonucleotide binding | 39.1304 | 5 | yes |
GO:0003924 | GTPase activity | 34.7826 | 7 | yes |
GO:0003723 | RNA binding | 23.9130 | 4 | no |
GO:0019003 | GDP binding | 21.7391 | 5 | no |
Biological process
Term | Name | % | Distance from top the of the tree | Annotated in RAB13_HUMAN |
---|---|---|---|---|
GO:0006996 | organelle organization | 47.8261 | 4 | yes |
GO:0008104 | protein localization | 47.8261 | 4 | yes |
GO:0048522 | positive regulation of cellular process | 43.4783 | 4 | no |
GO:0048523 | negative regulation of cellular process | 41.3043 | 4 | no |
GO:0015031 | protein transport | 36.9565 | 4 | yes |
GO:0071702 | organic substance transport | 36.9565 | 4 | yes |
GO:0071705 | nitrogen compound transport | 36.9565 | 4 | yes |
GO:0022607 | cellular component assembly | 34.7826 | 4 | yes |
GO:0051128 | regulation of cellular component organization | 34.7826 | 4 | no |
GO:0010646 | regulation of cell communication | 32.6087 | 4 | no |
GO:0060255 | regulation of macromolecule metabolic process | 32.6087 | 4 | no |
GO:0051049 | regulation of transport | 30.4348 | 4 | yes |
GO:0031323 | regulation of cellular metabolic process | 30.4348 | 4 | no |
GO:0080090 | regulation of primary metabolic process | 30.4348 | 4 | no |
GO:0033365 | protein localization to organelle | 28.2609 | 5 | no |
GO:0009966 | regulation of signal transduction | 28.2609 | 4 | no |
GO:0030030 | cell projection organization | 26.0870 | 4 | yes |
GO:0141124 | intracellular signaling cassette | 26.0870 | 4 | no |
GO:0009893 | positive regulation of metabolic process | 26.0870 | 4 | no |
GO:0007010 | cytoskeleton organization | 23.9130 | 5 | yes |
GO:0006915 | apoptotic process | 23.9130 | 4 | no |
GO:0072594 | establishment of protein localization to organelle | 23.9130 | 4 | no |
GO:0009889 | regulation of biosynthetic process | 23.9130 | 4 | no |
GO:0010468 | regulation of gene expression | 23.9130 | 6 | no |
GO:0010556 | regulation of macromolecule biosynthetic process | 23.9130 | 5 | no |
GO:0010604 | positive regulation of macromolecule metabolic process | 23.9130 | 5 | no |
GO:0031326 | regulation of cellular biosynthetic process | 23.9130 | 5 | no |
GO:0048584 | positive regulation of response to stimulus | 23.9130 | 4 | no |
GO:0007264 | small GTPase-mediated signal transduction | 21.7391 | 5 | no |
GO:0006886 | intracellular protein transport | 21.7391 | 4 | no |
GO:0044087 | regulation of cellular component biogenesis | 21.7391 | 4 | no |
GO:0051246 | regulation of protein metabolic process | 21.7391 | 5 | no |
GO:1902531 | regulation of intracellular signal transduction | 21.7391 | 5 | no |
GO:0072657 | protein localization to membrane | 19.5652 | 4 | yes |
GO:0120036 | plasma membrane bounded cell projection organization | 19.5652 | 5 | yes |
GO:0060627 | regulation of vesicle-mediated transport | 17.3913 | 4 | yes |
GO:0061024 | membrane organization | 17.3913 | 4 | yes |
GO:0010243 | response to organonitrogen compound | 15.2174 | 4 | yes |
GO:0016050 | vesicle organization | 15.2174 | 5 | yes |
GO:0031175 | neuron projection development | 15.2174 | 6 | yes |
GO:0032456 | endocytic recycling | 15.2174 | 4 | yes |
GO:0046903 | secretion | 15.2174 | 4 | yes |
GO:0051046 | regulation of secretion | 15.2174 | 5 | yes |
GO:0072659 | protein localization to plasma membrane | 15.2174 | 5 | yes |
GO:1990778 | protein localization to cell periphery | 15.2174 | 5 | yes |
GO:0017157 | regulation of exocytosis | 13.0435 | 5 | yes |
GO:0034330 | cell junction organization | 13.0435 | 4 | yes |
GO:0071310 | cellular response to organic substance | 13.0435 | 4 | yes |
GO:1901701 | cellular response to oxygen-containing compound | 13.0435 | 4 | yes |
GO:1903530 | regulation of secretion by cell | 13.0435 | 4 | yes |
GO:0006906 | vesicle fusion | 10.8696 | 6 | yes |
GO:0032870 | cellular response to hormone stimulus | 10.8696 | 4 | yes |
GO:0048284 | organelle fusion | 10.8696 | 5 | yes |
GO:0061025 | membrane fusion | 10.8696 | 5 | yes |
GO:0071417 | cellular response to organonitrogen compound | 10.8696 | 4 | yes |
GO:0090174 | organelle membrane fusion | 10.8696 | 6 | yes |
GO:1901699 | cellular response to nitrogen compound | 10.8696 | 4 | yes |
GO:0009306 | protein secretion | 8.6957 | 4 | yes |
GO:0032868 | response to insulin | 8.6957 | 5 | yes |
GO:0032869 | cellular response to insulin stimulus | 8.6957 | 6 | yes |
GO:0034329 | cell junction assembly | 8.6957 | 5 | yes |
GO:0035592 | establishment of protein localization to extracellular region | 8.6957 | 4 | yes |
GO:0043434 | response to peptide hormone | 8.6957 | 4 | yes |
GO:0048210 | Golgi vesicle fusion to target membrane | 8.6957 | 7 | yes |
GO:0048278 | vesicle docking | 8.6957 | 4 | yes |
GO:0071375 | cellular response to peptide hormone stimulus | 8.6957 | 5 | yes |
GO:0071692 | protein localization to extracellular region | 8.6957 | 5 | yes |
GO:0001667 | ameboidal-type cell migration | 6.5217 | 4 | yes |
GO:0010631 | epithelial cell migration | 6.5217 | 5 | yes |
GO:0043542 | endothelial cell migration | 6.5217 | 6 | yes |
GO:0002064 | epithelial cell development | 4.3478 | 4 | yes |
GO:0007043 | cell-cell junction assembly | 4.3478 | 6 | yes |
GO:0010737 | protein kinase A signaling | 4.3478 | 4 | yes |
GO:0030865 | cortical cytoskeleton organization | 4.3478 | 6 | yes |
GO:0030866 | cortical actin cytoskeleton organization | 4.3478 | 4 | yes |
GO:0035767 | endothelial cell chemotaxis | 4.3478 | 5 | yes |
GO:0044795 | trans-Golgi network to recycling endosome transport | 4.3478 | 4 | yes |
GO:0045216 | cell-cell junction organization | 4.3478 | 5 | yes |
GO:0060326 | cell chemotaxis | 4.3478 | 4 | yes |
GO:0070830 | bicellular tight junction assembly | 4.3478 | 8 | yes |
GO:0097368 | establishment of Sertoli cell barrier | 4.3478 | 4 | yes |
GO:0120192 | tight junction assembly | 4.3478 | 7 | yes |
GO:0120193 | tight junction organization | 4.3478 | 6 | yes |
GO:1902463 | protein localization to cell leading edge | 4.3478 | 5 | yes |
Disease
No data found.
Uniprot ID | Details | Highest evidence | Localizing into PSD | HPA (protein expression in neurons) |
---|---|---|---|---|
PDE6D_HUMAN | [view interactions] | Low throughput | no | yes |
MILK2_HUMAN | [view interactions] | Low throughput | no | no |
LERL1_HUMAN | [view interactions] | Low throughput | no | no |
ACTN4_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
OBRG_HUMAN | [view interactions] | Low throughput | no | no |
TBB3_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
GRB2_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
RAB8A_HUMAN | [view entry] [view interactions] | Low throughput | yes | no |
OCRL_HUMAN | [view interactions] | Low throughput | no | yes |
EH1L1_HUMAN | [view interactions] | Low throughput | no | yes |
MILK1_HUMAN | [view interactions] | Low throughput | no | yes |
RAB13_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
A4_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
GGA2_HUMAN | [view interactions] | Low throughput | no | yes |
ITB1_HUMAN | [view entry] [view interactions] | Low throughput | yes | no |
RAB7A_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
RB11A_HUMAN | [view entry] [view interactions] | Low throughput | yes | yes |
SMUF2_HUMAN | [view interactions] | High throughput | no | yes |
SMAD4_HUMAN | [view interactions] | High throughput | no | yes |
TGFR1_HUMAN | [view interactions] | High throughput | no | no |
GLUT4_HUMAN | [view interactions] | High throughput | no | no |
GDIA_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
SORT_HUMAN | [view interactions] | High throughput | no | yes |
RAB8B_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
PRD16_HUMAN | [view interactions] | High throughput | no | no |
MECOM_HUMAN | [view interactions] | High throughput | no | yes |
PPM1H_HUMAN | [view interactions] | High throughput | no | yes |
GBRD_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
BICL2_HUMAN | [view interactions] | High throughput | no | no |
E2F3_HUMAN | [view interactions] | High throughput | no | no |
BMI1_HUMAN | [view interactions] | High throughput | no | yes |
CAC1C_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
RAB10_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
RAB1B_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
TNPO1_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
PP6R1_HUMAN | [view interactions] | High throughput | no | no |
RS8_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
RS24_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
CPSF6_HUMAN | [view interactions] | High throughput | no | yes |
HXK1_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
CNOT1_HUMAN | [view interactions] | High throughput | no | yes |
RS3A_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
SHCBP_HUMAN | [view interactions] | High throughput | no | no |
CNOT9_HUMAN | [view interactions] | High throughput | no | yes |
DDX55_HUMAN | [view interactions] | High throughput | no | yes |
RAB35_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
ANR44_HUMAN | [view interactions] | High throughput | no | no |
LAMP1_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
TBA1A_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
RASK_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
RASN_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
RASH_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
CFTR_HUMAN | [view interactions] | High throughput | no | no |
RBG1L_HUMAN | [view interactions] | High throughput | no | yes |
UBL4A_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
RFA3_HUMAN | [view interactions] | High throughput | no | yes |
RFA2_HUMAN | [view interactions] | High throughput | no | yes |
RFA1_HUMAN | [view interactions] | High throughput | no | yes |
SRPRB_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
TF_HUMAN | [view interactions] | High throughput | no | no |
VSIG4_HUMAN | [view interactions] | High throughput | no | no |
TGON2_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
PCGF1_HUMAN | [view interactions] | High throughput | no | yes |
DPPA4_HUMAN | [view interactions] | High throughput | no | no |
NANOG_HUMAN | [view interactions] | High throughput | no | no |
PO5F1_HUMAN | [view interactions] | High throughput | no | yes |
DUS19_HUMAN | [view interactions] | High throughput | no | yes |
DUS6_HUMAN | [view interactions] | High throughput | no | yes |
FACD2_HUMAN | [view interactions] | High throughput | no | no |
TRI25_HUMAN | [view interactions] | High throughput | no | yes |
COPE_HUMAN | [view interactions] | High throughput | no | yes |
HIF1A_HUMAN | [view interactions] | High throughput | no | no |
UB2R1_HUMAN | [view interactions] | High throughput | no | yes |
WWOX_HUMAN | [view interactions] | High throughput | no | yes |
MYC_HUMAN | [view interactions] | High throughput | no | yes |
FLCN_HUMAN | [view interactions] | High throughput | no | yes |
NR2C2_HUMAN | [view interactions] | High throughput | no | yes |
BAG6_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
PKHA4_HUMAN | [view interactions] | High throughput | no | yes |
CTRO_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
ANLN_HUMAN | [view interactions] | High throughput | no | yes |
HNRH1_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
INS_HUMAN | [view interactions] | High throughput | no | no |
UBQL2_HUMAN | [view interactions] | High throughput | no | yes |
BTNL9_HUMAN | [view interactions] | High throughput | no | no |
INSRR_HUMAN | [view interactions] | High throughput | no | no |
ATG4A_HUMAN | [view interactions] | High throughput | no | yes |
SPT46_HUMAN | [view interactions] | High throughput | no | no |
WIF1_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
FFAR1_HUMAN | [view interactions] | High throughput | no | no |
MSS4_HUMAN | [view interactions] | High throughput | no | yes |
TSN3_HUMAN | [view interactions] | High throughput | no | yes |
LRC25_HUMAN | [view interactions] | High throughput | no | yes |
PVR_HUMAN | [view interactions] | High throughput | no | yes |
OPALI_HUMAN | [view interactions] | High throughput | no | yes |
ARL4D_HUMAN | [view interactions] | High throughput | no | no |
COPT1_HUMAN | [view interactions] | High throughput | no | no |
F174A_HUMAN | [view interactions] | High throughput | no | yes |
ENTP2_HUMAN | [view interactions] | High throughput | no | yes |
APJ_HUMAN | [view interactions] | High throughput | no | yes |
KCNE3_HUMAN | [view interactions] | High throughput | no | yes |
MICA_HUMAN | [view interactions] | High throughput | no | no |
BT3A3_HUMAN | [view interactions] | High throughput | no | yes |
S1PR4_HUMAN | [view interactions] | High throughput | no | no |
CAH14_HUMAN | [view interactions] | High throughput | no | yes |
SPRTN_HUMAN | [view interactions] | High throughput | no | yes |
BTF3_HUMAN | [view interactions] | High throughput | no | yes |
GDIB_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
SFPQ_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
CUL3_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
ATG5_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
RN115_HUMAN | [view interactions] | High throughput | no | yes |
TLR9_HUMAN | [view interactions] | High throughput | no | no |
ZRAN1_HUMAN | [view interactions] | High throughput | no | yes |
HSP7C_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
TRI67_HUMAN | [view interactions] | High throughput | no | no |
RPN2_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
EZH2_HUMAN | [view interactions] | High throughput | no | no |
PD1L1_HUMAN | [view interactions] | High throughput | no | no |
PTEN_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
TNIP1_HUMAN | [view interactions] | High throughput | no | yes |
RFFL_HUMAN | [view interactions] | High throughput | no | yes |
LONM_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
MIRO2_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
EXD2_HUMAN | [view interactions] | High throughput | no | yes |
LAMP2_HUMAN | [view interactions] | High throughput | no | yes |
LAMP3_HUMAN | [view interactions] | High throughput | no | no |
MARCS_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
RHOB_HUMAN | [view entry] [view interactions] | High throughput | yes | no |
MLP3B_HUMAN | [view interactions] | High throughput | no | yes |
NBR1_HUMAN | [view interactions] | High throughput | no | yes |
CACO2_HUMAN | [view interactions] | High throughput | no | yes |
MOB3B_HUMAN | [view interactions] | High throughput | no | no |
RAB18_HUMAN | [view entry] [view interactions] | High throughput | yes | yes |
TEX2_HUMAN | [view interactions] | High throughput | no | yes |
MUC18_HUMAN | [view interactions] | High throughput | no | yes |