Features Interactions Isoform Disease Linear motifs Fingerprint Network All partners

RAB13_HUMAN

The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. Rabs cycle between an inactive GDP-bound form and an active GTP-bound form that is able to recruit to membranes different sets of downstream effectors directly responsible for vesicle formation, movement, tethering and fusion. That Rab is involved in endocytic recycling and regulates the transport to the plasma membrane of transmembrane proteins like the tight junction protein OCLN/occludin. Thereby, it regulates the assembly and the activity of tight junctions. Moreover, it may also regulate tight junction assembly by activating the PKA signaling pathway and by reorganizing the actin cytoskeleton through the activation of the downstream effectors PRKACA and MICALL2 respectively. Through its role in tight junction assembly, may play a role in the establishment of Sertoli cell barrier. Plays also a role in angiogenesis through regulation of endothelial cells chemotaxis. Also involved in neurite outgrowth. Has also been proposed to play a role in post-Golgi membrane trafficking from the TGN to the recycling endosome. Finally, it has been involved in insulin-induced transport to the plasma membrane of the glucose transporter GLUT4 and therefore may play a role in glucose homeostasis. [View more on UniProt]

Interacting region for partners were not defined.

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No data found.

No annotated instance was found. To search for linear motifs, use the ELM prediction server.

Molecular function

Term Name % Distance from the top of the tree Annotated in RAB13_HUMAN
GO:0017076 purine nucleotide binding 47.0588 4 yes
GO:0032555 purine ribonucleotide binding 47.0588 4 yes
GO:0035639 purine ribonucleoside triphosphate binding 47.0588 4 yes
GO:0005525 GTP binding 35.2941 5 yes
GO:0016462 pyrophosphatase activity 35.2941 5 yes
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 35.2941 4 yes
GO:0017111 ribonucleoside triphosphate phosphatase activity 35.2941 6 yes
GO:0019001 guanyl nucleotide binding 35.2941 5 yes
GO:0032561 guanyl ribonucleotide binding 35.2941 5 yes
GO:0003924 GTPase activity 33.3333 7 yes
GO:0003723 RNA binding 21.5686 4 no

Biological process

Term Name % Distance from top the of the tree Annotated in RAB13_HUMAN
GO:0008104 protein localization 60.7843 4 yes
GO:0071702 organic substance transport 54.9020 4 yes
GO:0071705 nitrogen compound transport 54.9020 4 yes
GO:0015031 protein transport 54.9020 4 yes
GO:0016192 vesicle-mediated transport 52.9412 4 yes
GO:0006996 organelle organization 49.0196 4 yes
GO:0048522 positive regulation of cellular process 39.2157 4 no
GO:0048523 negative regulation of cellular process 33.3333 4 no
GO:0046903 secretion 33.3333 4 yes
GO:0051128 regulation of cellular component organization 31.3725 4 no
GO:0022607 cellular component assembly 31.3725 4 yes
GO:0051049 regulation of transport 31.3725 4 yes
GO:0031323 regulation of cellular metabolic process 29.4118 4 no
GO:0033365 protein localization to organelle 29.4118 5 no
GO:0010646 regulation of cell communication 27.4510 4 no
GO:0072657 protein localization to membrane 25.4902 4 yes
GO:0098876 vesicle-mediated transport to the plasma membrane 25.4902 4 yes
GO:0006887 exocytosis 25.4902 4 no
GO:0006886 intracellular protein transport 23.5294 4 no
GO:0009966 regulation of signal transduction 23.5294 4 no
GO:0060255 regulation of macromolecule metabolic process 23.5294 4 no
GO:0007010 cytoskeleton organization 23.5294 5 yes
GO:1990778 protein localization to cell periphery 21.5686 5 yes
GO:0051171 regulation of nitrogen compound metabolic process 21.5686 4 no
GO:0080090 regulation of primary metabolic process 21.5686 4 no
GO:0033043 regulation of organelle organization 21.5686 5 no
GO:0010243 response to organonitrogen compound 21.5686 4 yes
GO:0030030 cell projection organization 21.5686 4 yes
GO:0071310 cellular response to organic substance 19.6078 4 yes
GO:0120036 plasma membrane bounded cell projection organization 19.6078 5 yes
GO:0060627 regulation of vesicle-mediated transport 19.6078 4 yes
GO:0072659 protein localization to plasma membrane 17.6471 5 yes
GO:1901701 cellular response to oxygen-containing compound 17.6471 4 yes
GO:1903530 regulation of secretion by cell 17.6471 4 yes
GO:0051046 regulation of secretion 17.6471 5 yes
GO:0071417 cellular response to organonitrogen compound 15.6863 4 yes
GO:1901652 response to peptide 15.6863 4 yes
GO:1901699 cellular response to nitrogen compound 15.6863 4 yes
GO:0016050 vesicle organization 15.6863 5 yes
GO:0017157 regulation of exocytosis 15.6863 5 yes
GO:1901653 cellular response to peptide 13.7255 5 yes
GO:0016197 endosomal transport 13.7255 4 yes
GO:0032868 response to insulin 13.7255 5 yes
GO:0032870 cellular response to hormone stimulus 13.7255 4 yes
GO:0043434 response to peptide hormone 13.7255 4 yes
GO:0048278 vesicle docking 13.7255 4 yes
GO:0061024 membrane organization 13.7255 4 yes
GO:0071375 cellular response to peptide hormone stimulus 11.7647 5 yes
GO:0071692 protein localization to extracellular region 11.7647 5 yes
GO:0090174 organelle membrane fusion 11.7647 6 yes
GO:0006906 vesicle fusion 11.7647 6 yes
GO:0009306 protein secretion 11.7647 4 yes
GO:0031175 neuron projection development 11.7647 6 yes
GO:0032456 endocytic recycling 11.7647 5 yes
GO:0032869 cellular response to insulin stimulus 11.7647 6 yes
GO:0035592 establishment of protein localization to extracellular region 11.7647 4 yes
GO:0048284 organelle fusion 11.7647 5 yes
GO:0061025 membrane fusion 11.7647 5 yes
GO:0010737 protein kinase A signaling 7.8431 4 yes
GO:0034330 cell junction organization 7.8431 4 yes
GO:0048210 Golgi vesicle fusion to target membrane 7.8431 7 yes
GO:0001667 ameboidal-type cell migration 5.8824 4 yes
GO:0010631 epithelial cell migration 5.8824 5 yes
GO:0030865 cortical cytoskeleton organization 5.8824 6 yes
GO:0034329 cell junction assembly 5.8824 5 yes
GO:0043542 endothelial cell migration 5.8824 6 yes
GO:0070830 bicellular tight junction assembly 3.9216 8 yes
GO:0097368 establishment of Sertoli cell barrier 3.9216 4 yes
GO:0120192 tight junction assembly 3.9216 7 yes
GO:0120193 tight junction organization 3.9216 6 yes
GO:0002064 epithelial cell development 3.9216 4 yes
GO:0007043 cell-cell junction assembly 3.9216 6 yes
GO:0030866 cortical actin cytoskeleton organization 3.9216 4 yes
GO:0035767 endothelial cell chemotaxis 3.9216 5 yes
GO:0044795 trans-Golgi network to recycling endosome transport 3.9216 5 yes
GO:0045216 cell-cell junction organization 3.9216 5 yes
GO:0060326 cell chemotaxis 3.9216 4 yes

Disease

No data found.

Uniprot ID Details Highest evidence Localizing into PSD HPA (protein expression in neurons)
RAB7A_HUMAN [view entry] [view interactions] Low throughput yes yes
RB11A_HUMAN [view entry] [view interactions] Low throughput yes yes
PDE6D_HUMAN [view interactions] Low throughput no yes
MILK2_HUMAN [view interactions] Low throughput no no
LERL1_HUMAN [view interactions] Low throughput no no
ACTN4_HUMAN [view entry] [view interactions] Low throughput yes yes
OBRG_HUMAN [view interactions] Low throughput no no
TBB3_HUMAN [view entry] [view interactions] Low throughput yes yes
GRB2_HUMAN [view entry] [view interactions] Low throughput yes yes
RAB8A_HUMAN [view entry] [view interactions] Low throughput yes no
OCRL_HUMAN [view interactions] Low throughput no yes
EH1L1_HUMAN [view interactions] Low throughput no yes
MILK1_HUMAN [view interactions] Low throughput no yes
RAB13_HUMAN [view entry] [view interactions] Low throughput yes yes
A4_HUMAN [view entry] [view interactions] Low throughput yes yes
GGA2_HUMAN [view interactions] Low throughput no yes
ITB1_HUMAN [view entry] [view interactions] Low throughput yes no
SPT46_HUMAN [view interactions] High throughput no no
WIF1_HUMAN [view entry] [view interactions] High throughput yes no
FFAR1_HUMAN [view interactions] High throughput no no
MSS4_HUMAN [view interactions] High throughput no yes
TSN3_HUMAN [view interactions] High throughput no yes
LRC25_HUMAN [view interactions] High throughput no yes
PVR_HUMAN [view interactions] High throughput no yes
OPALI_HUMAN [view interactions] High throughput no yes
ARL4D_HUMAN [view interactions] High throughput no no
COPT1_HUMAN [view interactions] High throughput no no
F174A_HUMAN [view interactions] High throughput no yes
ENTP2_HUMAN [view interactions] High throughput no yes
APJ_HUMAN [view interactions] High throughput no yes
KCNE3_HUMAN [view interactions] High throughput no yes
MICA_HUMAN [view interactions] High throughput no no
BT3A3_HUMAN [view interactions] High throughput no yes
S1PR4_HUMAN [view interactions] High throughput no no
CAH14_HUMAN [view interactions] High throughput no yes
SPRTN_HUMAN [view interactions] High throughput no yes
BTF3_HUMAN [view interactions] High throughput no yes
GDIB_HUMAN [view entry] [view interactions] High throughput yes yes
SFPQ_HUMAN [view entry] [view interactions] High throughput yes yes
RFFL_HUMAN [view interactions] High throughput no yes
LONM_HUMAN [view entry] [view interactions] High throughput yes yes
MIRO2_HUMAN [view entry] [view interactions] High throughput yes yes
EXD2_HUMAN [view interactions] High throughput no yes
LAMP2_HUMAN [view interactions] High throughput no yes
LAMP3_HUMAN [view interactions] High throughput no no
MARCS_HUMAN [view entry] [view interactions] High throughput yes yes
RHOB_HUMAN [view entry] [view interactions] High throughput yes no
MLP3B_HUMAN [view interactions] High throughput no yes
NBR1_HUMAN [view interactions] High throughput no yes
CACO2_HUMAN [view interactions] High throughput no yes
SMUF2_HUMAN [view interactions] High throughput no yes
TGFR1_HUMAN [view interactions] High throughput no no
SMAD4_HUMAN [view interactions] High throughput no yes
GLUT4_HUMAN [view interactions] High throughput no no
GDIA_HUMAN [view entry] [view interactions] High throughput yes yes
SORT_HUMAN [view interactions] High throughput no yes
RAB8B_HUMAN [view entry] [view interactions] High throughput yes no
PRD16_HUMAN [view interactions] High throughput no no
MECOM_HUMAN [view interactions] High throughput no yes
PPM1H_HUMAN [view interactions] High throughput no yes
GBRD_HUMAN [view entry] [view interactions] High throughput yes yes
BICL2_HUMAN [view interactions] High throughput no no
E2F3_HUMAN [view interactions] High throughput no no
BMI1_HUMAN [view interactions] High throughput no yes
RAB10_HUMAN [view entry] [view interactions] High throughput yes yes
RAB1B_HUMAN [view entry] [view interactions] High throughput yes yes
TNPO1_HUMAN [view entry] [view interactions] High throughput yes yes
ANR44_HUMAN [view interactions] High throughput no no
RAB35_HUMAN [view entry] [view interactions] High throughput yes yes
DDX55_HUMAN [view interactions] High throughput no yes
CNOT9_HUMAN [view interactions] High throughput no yes
SHCBP_HUMAN [view interactions] High throughput no no
RS3A_HUMAN [view entry] [view interactions] High throughput yes yes
CNOT1_HUMAN [view interactions] High throughput no yes
HXK1_HUMAN [view entry] [view interactions] High throughput yes yes
CPSF6_HUMAN [view interactions] High throughput no yes
RS24_HUMAN [view entry] [view interactions] High throughput yes yes
RS8_HUMAN [view entry] [view interactions] High throughput yes no
PP6R1_HUMAN [view interactions] High throughput no no
LAMP1_HUMAN [view interactions] High throughput no yes
TBA1A_HUMAN [view entry] [view interactions] High throughput yes yes
RASK_HUMAN [view entry] [view interactions] High throughput yes no
RASN_HUMAN [view entry] [view interactions] High throughput yes no
RASH_HUMAN [view entry] [view interactions] High throughput yes no
RBG1L_HUMAN [view interactions] High throughput no yes
UBL4A_HUMAN [view entry] [view interactions] High throughput yes yes
RFA3_HUMAN [view interactions] High throughput no yes
RFA2_HUMAN [view interactions] High throughput no yes
RFA1_HUMAN [view interactions] High throughput no yes
SRPRB_HUMAN [view entry] [view interactions] High throughput yes no
TF_HUMAN [view interactions] High throughput no no
VSIG4_HUMAN [view interactions] High throughput no no
TGON2_HUMAN [view interactions] High throughput no yes
PCGF1_HUMAN [view interactions] High throughput no yes
DPPA4_HUMAN [view interactions] High throughput no no
NANOG_HUMAN [view interactions] High throughput no no
PO5F1_HUMAN [view interactions] High throughput no yes
DUS19_HUMAN [view interactions] High throughput no yes
DUS6_HUMAN [view interactions] High throughput no yes
FACD2_HUMAN [view interactions] High throughput no no
TRI25_HUMAN [view interactions] High throughput no yes
COPE_HUMAN [view interactions] High throughput no yes
HIF1A_HUMAN [view interactions] High throughput no no
UB2R1_HUMAN [view interactions] High throughput no yes
WWOX_HUMAN [view interactions] High throughput no yes
MYC_HUMAN [view interactions] High throughput no yes
FLCN_HUMAN [view interactions] High throughput no yes
NR2C2_HUMAN [view interactions] High throughput no yes
BAG6_HUMAN [view entry] [view interactions] High throughput yes yes
PKHA4_HUMAN [view interactions] High throughput no yes
CTRO_HUMAN [view entry] [view interactions] High throughput yes yes
ANLN_HUMAN [view interactions] High throughput no yes
HNRH1_HUMAN [view entry] [view interactions] High throughput yes yes
INS_HUMAN [view interactions] High throughput no no
UBQL2_HUMAN [view interactions] High throughput no yes
BTNL9_HUMAN [view interactions] High throughput no no
INSRR_HUMAN [view interactions] High throughput no no
ATG4A_HUMAN [view interactions] High throughput no yes
EXOC7_HUMAN [view entry] [view interactions] Computational yes yes
KAPCB_HUMAN [view entry] [view interactions] Computational yes yes
TBCD4_HUMAN [view interactions] Computational no yes
EXOC3_HUMAN [view entry] [view interactions] Computational yes no
EXOC5_HUMAN [view entry] [view interactions] Computational yes yes
EXOC6_HUMAN [view entry] [view interactions] Computational yes yes
LCAP_HUMAN [view interactions] Computational no yes
RSP14_HUMAN [view interactions] Computational no no
DEN1C_HUMAN [view interactions] Computational no no
EXOC2_HUMAN [view entry] [view interactions] Computational yes no
SNP23_HUMAN [view entry] [view interactions] Computational yes no
KAPCG_HUMAN [view interactions] Computational no no
MYO5A_HUMAN [view entry] [view interactions] Computational yes yes
EXOC8_HUMAN [view entry] [view interactions] Computational yes yes
KAPCA_HUMAN [view entry] [view interactions] Computational yes yes
TBCD1_HUMAN [view interactions] Computational no no
EXOC4_HUMAN [view entry] [view interactions] Computational yes yes
DEN2B_HUMAN [view interactions] Computational no yes
RALA_HUMAN [view entry] [view interactions] Computational yes yes
EXOC1_HUMAN [view entry] [view interactions] Computational yes yes
STXB3_HUMAN [view entry] [view interactions] Computational yes yes